P
rotein
I
nter
C
hain
I
nteractions
Center for Bioinformatics
,
Pondicherry University
Protein BLAST
Blast against
PDB_Protein_Data_Bank
UniProtKB/Swiss-Prot
Input sequence
BLAST matrix:
BLOSUM45
BLOSUM62
BLOSUM80
PAM70
PAM30
Gap penalty:
9
10
11
12
13
Extension:
1
2
Threshold:
0.0001
0.001
0.01
0.1
1
10
100
1000
Choose
example sequence
here